CDS

Accession Number TCMCG073C35650
gbkey CDS
Protein Id XP_010521537.1
Location complement(join(164538..164866,164949..165063,165152..165309,165409..165509,165634..165782,165864..166014,166189..166342,166548..166647,166804..167034))
Gene LOC104800439
GeneID 104800439
Organism Tarenaya hassleriana

Protein

Length 495aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010523235.2
Definition PREDICTED: signal recognition particle 54 kDa protein 3 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category U
Description Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein)
KEGG_TC 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9
KEGG_Module M00335        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko02044        [VIEW IN KEGG]
KEGG_ko ko:K03106        [VIEW IN KEGG]
EC 3.6.5.4        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko02024        [VIEW IN KEGG]
ko03060        [VIEW IN KEGG]
ko03070        [VIEW IN KEGG]
map02024        [VIEW IN KEGG]
map03060        [VIEW IN KEGG]
map03070        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005786        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048500        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGTTGGCGGAGCTTGGTGGGCGGATTACCCGCGCCATACAGCAGATGAGCAATGCCACGATCATCGATGAGAAGGTTCTGAACGAGTGCTTGAACGAGATTACTCGCGCTCTGCTTCAGTCCGATGTTTCGTTTCCCCTCGTTAAGGAGATGCAGACCAATATCAAGAAGATCGTCAACCTCGACGATCTCGCCGCAGGCCACAACAAGCGTAGGATCATTCAACAGGCTATCTTCAATGAGCTTTGTAAGATGCTTGATCCAGGAAAACCTGCATTCGCCCCTAAAAAGGGTAAACCCAGTATAGTCATGTTCGTCGGTTTACAAGGTGCTGGAAAAACCACAACATGTACCAAGTATGCTTACTATCATCAGAAGAAGGGCTATAAGCCAGCTCTGGTGTGTGCCGATACTTTCAGGGCTGGTGCTTTTGATCAGCTGAAACAGAATGCTACCAAAGCTAAGATCCCATTTTATGGAAGCTACACAGAATCAGATCCTGTGAGAATTGCTGCTGAAGGAGTGGAAAGATTCAAGAAAGAAAACTGTGATCTTATCATCGTGGACACCAGTGGTCGCCATAAACAGGAAGCTGCTCTTTTTGAAGAAATGCGTCAAGTTGCTGAAGCAACGAAACCAGATCTTGTTATATTTGTCATGGACAGCAGTATTGGTCAAGCTGCATTTGATCAAGCTCAAGCGTTCAAGCAAAGTGTTGCTGTAGGAGCTGTTATAGTTACTAAGATGGATGGCCATGCAAAGGGTGGTGGTGCTCTCAGTGCTGTTGCAGCAACAAAAAGTCCCGTCATATTCATCGGAACGGGAGAGCATATGGATGAATTTGAAGTCTTTGATGTTAAACCGTTTGTCAGCCGTCTCTTGGGGATGGGTGATTGGTCGGGATTCATGGATAAAATTCATGAGGTGGTGCCTAAAGATCAACAGCCTCAACTTCTGGAAAAGCTATCGCAGGGTAACTTTACACTGAGAATAATGTATGAACAGTTCCAGAACATACTCAACATGGGCCCGATTGGTCAGGTATTTTCTATGCTTCCCGGATTTAGTGCGGAATTGATGCCAAAAGGGCATGAGAAAGAAAGCCAGGCGAAGATAAAGCGCTACATGACGATGATGGACTCAATGACAAATGAAGAGCTGGACAGCTCAAACCCGAAGGTGTTCAACGAGTCGAGGATGATGAGGATAGCGAGAGGGTCGGGGAGACACATAAGGGAAGTGATGGATATGCTGGAAGAGTACAAGAGGCTGGCGAAGATATGGAGCAACATGAAAGGGCTGAAGATACCGAAGAAGGGAGACATGAGCGCGTTGTCGAGGAACATGAACGCGCAGCACATGAGCAAGGTCCTTCCACCTCACATGCTCAAACAGATCGGCGGCATGGGCGGTCTCCAGAGTCTCATGAAGCAGATGGGTTCGGCCAAAGACATGATGGGTATGTTCGGCGGCGGCGACAAGTAG
Protein:  
MVLAELGGRITRAIQQMSNATIIDEKVLNECLNEITRALLQSDVSFPLVKEMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPAFAPKKGKPSIVMFVGLQGAGKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAAEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPKDQQPQLLEKLSQGNFTLRIMYEQFQNILNMGPIGQVFSMLPGFSAELMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKVFNESRMMRIARGSGRHIREVMDMLEEYKRLAKIWSNMKGLKIPKKGDMSALSRNMNAQHMSKVLPPHMLKQIGGMGGLQSLMKQMGSAKDMMGMFGGGDK